New Saccharomyces Sequences 11/30/96

SGD Sequences yeast-seq at GENOME.STANFORD.EDU
Sat Nov 30 07:16:38 EST 1996


=========== New Sequences =============

SCMRP15GE   Y09436      244bp    DNA      PLN      25-NOV-1996
    S.cerevisiae mitochondrial RP-L15 gene.
    mitochondrial ribosomal protein; MRP-L15 gene; MRP-L15.

SCSME1GEN   X92449      573bp    DNA      PLN      25-NOV-1996
    S.cerevisiae SME1 gene.
    core snRNP protein E; pre-mRNA splicing; SME1 gene; SME1.

YABF1       X51654     2975bp    DNA      PLN      25-NOV-1996
    S.cerevisiae DNA for ARS binding protein 1 gene.
    ABF1 gene; ABF1; ARS-binding protein 1.

=========== Updated Features/Annotations  =============

SCALD2      X85987     2079bp    DNA      PLN      25-NOV-1996
    S.cerevisiae ALD2 gene.
    ALD2 gene; aldehyde dehydrogenase; ALD2; aldehyde dehydrogenase
     (NAD(P)+).

SCCEG1SOH   X87252    10000bp    DNA      PLN      25-NOV-1996
    S.cerevisiae CEG1, G2856, G2861 and SOH1 genes.
    CEG1 gene; DnaJ; G2856 gene; G2861 gene; SOH1 gene; CEG1; G2856; G2861;
     SOH1.

SCCHRIII    X59720 S43845 S49180 S58084 S93798   315341bp    DNA      PLN      25-NOV-1996
    S.cerevisiae chromosome III complete DNA sequence.
    chromosome; HML; CHA1; threonine dehydratase; DTP1; PDI1; protein
     disulfide isomerase; GLK1; HIS4; BIK1; FUS1; LEU2; NFS1; CEN3; CIT2;
     RVS161; PGK1; PET18; CRY1; MAT; TSM1; THR4; RAD18; ERS1; TUP1; ABP1;
     HMR.

SCCHROIV    X82086    32821bp    DNA      PLN      26-NOV-1996
    S.cerevisiae DNA for right arm of chromosome IV.
    leucine; AFR1 gene; arginine tRNA; endoplasmic reticulum protein; D4405;
     8 putative transmembrane spans; D4406; 1 putative transmembrane span;
     D4411; D4416; trehalose-6-phosphate synthase /phosphatase; D4421;
     protein phosphatase 2A; D4426; D4431; D4436; 3 putative transmembrane
     spans; D4441; 1 putative transmembrane spans; D4446; D4451; D4456;
     D4461; 2 putative transmembrane spans; D4466; 4 putative transmembrane
     spans; D4471; D4472; D4473; D4475; protein of endoplasmic reticulum;
     D4478; D4483; splicing factor; D4490; arginine t-RNA; D4495; 1 leucine
     zipper pattern.

SCNBP35     X95533     2148bp    DNA      PLN      28-NOV-1996
    S.cerevisiae NBP35 gene.
    NBP35 gene; nucleotide-binding protein; NBP35; nucleotide-binding protein
     of 35kD.

SCPPH21     X58856     2249bp    DNA      PLN      26-NOV-1996
    S.cerevisiae PPH21 gene for protein phosphatase 2A.
    PPH21 gene; protein phosphatase 2A; PPH21.

SCPPH22     X58857     4177bp    DNA      PLN      26-NOV-1996
    S.cerevisiae PPH22 gene for protein phosphatase 2A.
    PPH22 gene; protein phosphatase 2A; TFP1 /VMA1; PPH22.

SCPPH3      X58858     2884bp    DNA      PLN      26-NOV-1996
    S.cerevisiae PPH3 gene for type 2A-related protein phosphatase 2A.
    PPH3 gene; type 2A-related protein phosphatase; PPH3.

SCSIP18     X85988     1042bp    DNA      PLN      25-NOV-1996
    S.cerevisiae SIP18 gene.
    SIP18 gene; SIP18.

YSCHUS2     D50324     2570bp    DNA      PLN      29-NOV-1996
    Saccharomyces cerevisiae.
    HYS2; translation initiation factor 2 alpha subunit; sui2; hys2.

YSCPAS5A    M86538     1464bp    DNA      PLN      27-NOV-1996
    Saccharomyces cerevisiae pas5 gene, complete cds.
    peroxisome; pas5.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://ftp2.ddbj.nig.ac.jp:8000/cgi-bin/getent/



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