QUERY: Identity of all intron-containing yeast genes

Ken Howe howe at DARWIN.UCSC.EDU
Sat Feb 8 01:14:15 EST 1997


Chris,
you can find a list of yeast intron-containing genes at a couple places. 
 Since I'm not at my usual computer, I don't have the URLs, but you can
access them by following the link from my homepage (hey, I gotta get
some traffic, even if it's just passing through).  Go to the Ares' lab
homepage from there, then take the link to the "introns" page.  You
should note that this is only a partial list, but probably the most
complete one you'll find anywhere.  Those that are missing include
intron-containing RNAs such as U3A/U3B and a few others.

My URL is at the end of this note.

Hope this helps.

Ken

On 8 Feb 1997,
Chris Patil wrote:

> Analysis of the S. cerevisiae genome suggests that there are 220 ORFs
> which contain introns. I'd like to get a complete list, but I can't figure
> out how to search the databases for all genes containing introns. (Already
> tried FASTA search on UACUAACA, but that didn't work.)
> 
> If anyone knows of a complete list on the web or ftp somewhere, or could
> just provide a hint about how to search the database comprehensively for
> introns, I would very much like to hear from them.


               "You know, it sure would be amino world without RNA"
                     _______________________________________

                                  Kenneth Howe
                     Center for the Molecular Biology of RNA
                             Department of MCD Biology
                             University of California
                              Santa Cruz, CA  95064
                     _______________________________________

                          e-mail: howe at darwin.ucsc.edu
               http://www-biology.ucsc.edu/people/areslab/ken.html




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