New Saccharomyces Sequences 01/18/97
SGD Sequences
yeast-seq at GENOME.STANFORD.EDU
Sat Jan 18 07:04:30 EST 1997
=========== New Sequences =============
SCEXO70 Y08787 1872bp DNA PLN 15-JAN-1997
S.cerevisiae EXO70 gene.
multiprotein70 kD Exocyst complex protein; EXO70 gene; exocytosis; EXO70.
SCFLP5 Y10429 248bp DNA PLN 13-JAN-1997
Artificial plasmid DNA containing 5' sequence of yeast FLP gene.
FLP gene; FLP.
SCSEC10 Y08789 2616bp DNA PLN 15-JAN-1997
S.cerevisiae SEC10 gene.
100 kD Exocyst complex protein; exocytosis; multiprotein complex; SEC10
gene; SEC10; 100 kD exocyst complex component.
SCSEC5 Y08788 2916bp DNA PLN 15-JAN-1997
S.cerevisiae SEC5 gene.
107 kD Exocyst complex protein; exocytosis; multiprotein complex; SEC5
gene; SEC5.
SCU05336 U05336 2699bp DNA PLN 18-JAN-1997
Saccharomyces cerevisiae sec sixty-one protein homolog (Ssh1) gene,
complete cds.
Ssh1; sec sixty-one protein homolog.
SCU10280 U10280 3066bp DNA PLN 17-JAN-1997
Saccharomyces cerevisiae Ume1p (UME1) and Mkk2p (MKK2) genes, complete
cds.
UME1; Ume1p; MKK2; Mkk2p.
SCU79459 U79459 897bp DNA PLN 16-JAN-1997
Saccharomyces cerevisiae dicarboxylate transport protein gene, nuclear
gene encoding mitochondrial protein, complete cds.
dicarboxylate transport protein.
=========== Updated Features/Annotations =============
D87274 D87274 3104bp DNA PLN 17-JAN-1997
Yeast DNA for PTK2p, complete cds.
PTK2p; PTK2.
SC8248 Z46373 25135bp DNA PLN 15-JAN-1997
S.cerevisiae chromosome XIII cosmid 8248.
3-hydroxy-3methylglutaryl-coenzyme A reductase; CPR3; cyclophilin; CYP3;
FKBP; HMG1; peptidylprolyl cis-trans isomerase; ribosomal protein;
YL16A; CPR3 or CYP3; YL16a.
SCACB1 Y08687 2656bp DNA PLN 13-JAN-1997
S.cerevisiae genes ACB1 and ORM1.
ACB1 gene; ORM1 gene; ORM1; ACB1.
SCCHRIVFY X96876 26756bp DNA PLN 14-JAN-1997
S.cerevisiae DNA of cosmid from chromosome IV, strain FY 1679.
rho GDP dissociation; ARF2 gene; BPL1 gene; PPH21 gene; RGT2 gene; BPL1;
biotin apo-protein ligase; D2145; RPB1; D2155; RGT2; ARF2; ribosomal L35
protein; rho GDP dissociation factor; PPH21; ribosomal protein L41B;
D2185; D2190; D2195.
SCCYCL X17505 722bp RNA PLN 15-JAN-1997
Yeast mRNA for cyclophilin.
cyclophilin; peptidylprolyl cis-trans isomerase.
SCDNASIMP X90459 1865bp DNA PLN 13-JAN-1997
S.cerevisiae DNA for SOM1 gene.
SOM1 gene; suppressor of imp1; SOM1; suppressor of imp1 mutant.
SCGLO1 X99240 2500bp DNA PLN 16-JAN-1997
S.cerevisiae GLO1 gene.
GLO1 gene; glyoxalase I; GLO1.
SCHRVIILT X94357 39411bp DNA PLN 14-JAN-1997
S.cerevisiae left telomeric region from chromosome VII.
ADH4 gene; FZF1 gene; HXK2 gene; PDE1 gene; RTG2 gene; ADH4; FZF1
alternate name SUL1; HXK2 alternate name HEX1;SCI2;HKB; RTG2; HFM1;
PDE1.
SCOST5GEN X97545 652bp DNA PLN 15-JAN-1997
S.cerevisiae OST5 gene.
9.5 kD subunit; N-oligosaccharyltransferase; OST5 gene; OST5; 9.5 kD
subunit of N-oligosaccharyltransferase.
SCU16015 U16015 5100bp DNA PLN 17-JAN-1997
Saccharomyces cerevisiae ribosomal protein YL19 (RPL19B) gene, complete
cds.
RPL19B; ribosomal protein YL19.
SCU50630 U50630 3259bp DNA PLN 16-JAN-1997
Saccharomyces cerevisiae Vps28p (VPS28) gene, complete cds.
VPS28; Vps28p.
SCU62525 U62525 2388bp DNA PLN 18-JAN-1997
Saccharomyces cerevisiae Sds3p (SDS3) gene, complete cds.
SDS3; Sds3p.
SCYPT31 X72833 1265bp DNA PLN 14-JAN-1997
S.cerevisiae YPT3A gene.
YPT31 gene; YPT31; Ypt31p.
SCYPT32 X72834 1193bp DNA PLN 14-JAN-1997
S.cerevisiae YPT3B gene.
YPT32 gene; YPT32; Ypt32p.
Please note that new sequences take about a week to appear in SGD. To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
World Wide Web links for sequences:
Only Yeast: http://genome-www.stanford.edu/cgi-bin/genbank_search
BLAST & FASTA: http://genome-www.stanford.edu/Saccharomyces/
NCBI (GenBank): http://www.ncbi.nlm.nih.gov/Web/Search/
EBI (EMBL): http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
DDBJ: http://ftp2.ddbj.nig.ac.jp:8000/cgi-bin/getent/
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