New Saccharomyces Sequences 07/17/97

SGD Sequences yeast-seq at GENOME.STANFORD.EDU
Thu Jul 17 06:20:09 EST 1997


====================== New DNA Sequences =======================

AF008236    AF008236     1986bp    DNA      PLN      17-JUL-1997
    Saccharomyces cerevisiae Sph1p (SPH1) gene, complete cds.
    SPH1; Sph1p.

==================== Updated DNA Sequences =====================

YSCL8543    U20618    37730bp    DNA      PLN      16-JUL-1997
    Saccharomyces cerevisiae chromosome XII cosmid 8543.
    CDC25; Cdc25p: regulatory protein of adenylate cyclase; YLR311C;
     Ylr311cp; YLR312C; Ylr312cp; MRPL15; Mrpl15p: mitochondrial ribosomal
     protein YmL15; YLR313C; Ylr313cp; CDC3; Cdc3p: component of 10 nm
     filaments of; mother-bud neck; ; YLR315w; Ylr315wp; YLR316C; Ylr316cp;
     YLR317W; Ylr317wp; EST2; Est2p: putative subunit of telomerase; BUD6;
     Bud6p: actin interacting protein; YLR320W; Ylr320wp; YLR321C; Ylr321cp;
     YLR322W; Ylr322wp; YLR323C; Ylr323cp; YLR324W; Ylr324wp; YLR325C;
     Ylr325cp; YLR326W; Ylr326wp; YLR327C; Ylr327cp; tRNA-Ser; YLR328W;
     Ylr328wp; REC102; Rec102p: Required for early meiotic;  recombination
     events; ; YLR330W; Ylr330wp; YLR331C; Ylr331cp; MID2; Mid2p: Mating
     process protein.

=========== Updated Sequence Features/Annotations  =============

SCYNL029C   Z71305     2541bp    DNA      PLN      14-JUL-1997
    S.cerevisiae chromosome XIV reading frame ORF YNL029c.
    KTR5.

SCYNL339C   Z71615     6560bp    DNA      PLN      14-JUL-1997
    S.cerevisiae chromosome XIV reading frame ORF YNL339c.

YSCCHRVIN   D50617 D44605   270148bp    DNA      PLN      16-JUL-1997
    Saccharomyces cerevisiae chromosome VI complete DNA sequence.
    12KD heat shock protein; 96KD nucleoporine-interacting component; DNA
     polymerase epsilon suppressor 4; FAB1 protein; GTP-binding protein YPT1;
     MDJ1 protein precursor; MutS protein homolog 4; YFL011W; actin; bZIP
     protein binding to CRE motif; calcium/calmodulin-dependent protein
     kinase type I; cell division control protein 14; cell division control
     protein 4; cell division control protein CDC26; chromosome segregation
     protein SMC1; chromosome segregation protein SMC2p; cytoplasmic
     phenylalanyl-tRNA synthetase beta chain; depressed growth-rate protien;
     dihydrolipoamide dehydrogenase precursor; glucose; glycogen synthase
     isoform 1; hexokinase A; histidinol phosphatase; lipid-regulated
     protein; mitochondrial DNA-directed RNA polymerase; mitochondrial
     ribosomal protein YMR-31 precursor; nuclear integrity protein 1;
     pheromone alpha factor receptor; phosphate system positive regulatory
     protein; phosphomannomutase; probable protein-tyrosine phosphatase;
     protein YP2; proteosome component PRE4; putative rRNA helicase;
     ras-related protein; sulfite reductase flavoprotein component;
     transposon TY1-17 154.0KD hypothetical protein; transposon TY1-17 49.8KD
     hypothetical protein; tubulin beta chain; ubiquinol-cytochrome C
     reductase 17KD protein; SEC53; Phosphomannomutase; ACT1; Actin; YPT1;
     GTP-binding protein YPT1 (Protein YP2); TUB2; Tubulin beta chain; RPO41;
     Mithochondrial DNA-directed RNA polymerase; HAC1; bZIP protein binding
     to the CRE motif; STE2; Pheromone alpha factor receptor; FRS2;
     Cytoplasmic phenylalanyl-tRNA synthetase beta;  chain; ; LPD1;
     Dihydrolipoamide dehydrogenase precursor; MDJ1; HSP12 (GLP1); 12KD heat
     shock protein (glucose and;  lipid-regulated protein); ; CDC4; Cell
     division control protein 4; SMC1; Chromosome segregation protein SMC1;
     SEC4; Ras-related protein; MSH4; TyA; Transposon TY1-17 49.8KD
     hypothetical protein; TyB; Transposon TY1-17 154.0KD hypothetical
     protein; SPB4; Putative rRNA helicase; DEG1; Depressed growth-rate
     protein; NIC96; 96KD nucleoporin-interacting component; SUF20; SUP11;
     CMK1; Calcium/Calmodulin-dependent protein kinase type;  I; ; GSY1;
     Glycogen synthase isoform 1; FAB1; PES4; DNA polymerase epsilon
     suppressor 4; HIS2; Histidinol phosphatase; CDC14; Cell division control
     protein 14 (probable;  protein-tyrosine phosphatase); ; SUP6; MET10;
     Sulfite reductase (NADPH) flavoprotein; SMC2; Chromosome segregation
     protein (DA-BOX protein);  SMC2p; ; QCR6; Ubiquinol-cytochrome C
     reductase 17KD protein; PHO4; CDC26; Cell division control protein
     CDC26; YMR31; Mithochondrial ribosomal protein YMR-31;  precursor; ;
     PRE4; Proteosome component PRE4; NIN1; Nuclear integrity protein 1;
     HXK1; Hexokinase A.

YSCF4121F   D44598    18837bp    DNA      PLN      16-JUL-1997
    Saccharomyces cerevisiae chromosome VI phage 4121.
    GTP-binding protein; DNA-directed RNA polymerase mitochondrial; ACT1;
     actine; YPT1; GTP-BINDING PROTEIN YPT1(YP2); TUB2; TUBULIN BETA CHAIN;
     RPO41; DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://ftp2.ddbj.nig.ac.jp:8000/cgi-bin/getent/



More information about the Yeast mailing list