New Saccharomyces Sequences 09/09/97

SGD Sequences yeast-seq at GENOME.STANFORD.EDU
Tue Sep 9 14:11:28 EST 1997


=========== Updated Sequence Features/Annotations  =============

YSCH8082    U10399 U00093    28124bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid 8082.
    DED81; Ded81p: Asparaginyl-tRNA synthetase; YHR020w; Yhr020wp; tA(AGC)H;
     tRNA-Ala; RPS27B; Rps27bp: 40S ribosomal protein S27-2; ECM12; Ecm12p;
     YHR022c; Yhr022cp; MYO1; Myo1p: Myosin class V, alpha-helical middle;
     MAS2; Mas2p: 53kDa subunit of the mitochondrial processing protease;
     THR1; Thr1p: Homoserine kinase; PPA1; Ppa1p: Proteolipid protein of
     proton ATPase; YHR027c; Yhr027cp; DAP2; Dap2p: Dipeptidyl aminopeptidase
     B (DAP2_YEAST); YHR029c; Yhr029cp.

YSCH8179    U00062 U00093    44113bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid 8179.
    SLT2; Slt2p: Putative Ser/Thr protein kinases; YHR031c; Yhr031cp;
     YHR032w; Yhr032wp; YHR033w; Yhr033wp; YHR034c; Yhr034cp; YHR035w;
     Yhr035wp; YHR036w; Yhr036wp; PUT2; Put2p:
     Delta-1-Pyrroline-5-Carboxylate Dehydrogenase (P5C Dehydrogenase);
     YHR038w; Yhr038wp; YHR039c; Yhr039cp; VMA10; Vma10p: 13 kDa vacuolar
     H-ATPase subunit; YHR040w; Yhr040wp; SRB2; Srb2p: RNA polymerase II SRB
     subcomplex subunit; NCP1; Ncp1p: NADP-cytochrome P450 reductase; DOG2;
     Dog2p: 2-deoxyglucose-6-phosphate phosphatase; DOG1; Dog1p:
     2-deoxyglucose-6-phosphate phosphatase; YHR045w; Yhr045wp; YHR046c;
     Yhr046cp; AAP1'; Aap1'p: arginine/alanine aminopeptidase; YHR048W;
     Yhr048wp; YHR049w; Yhr049wp; YHR049C-A; Yhr049c-ap; SMF2; Smf2p; COX6;
     Cox6p: cytochrome c oxidase subunit VI; YHR052w; Yhr052wp.

YSCH8263    U00059 U00093    39954bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid 8263.
    YHR100c; Yhr100cp; YHR101c; Yhr101cp; NRK1; Nrk1p: Ser/Thr kinases;
     SBE22; Sbe22p; YHR104w; Yhr104wp; YHR105w; Yhr105wp; YHR106w; Yhr106wp;
     CDC12; Cdc12p: Component of 10nm filamemts of mother-bud neck(septin);
     YHR108w; Yhr108wp; YHR109w; Yhr109wp; YHR110w; Yhr110wp; YHR111w;
     Yhr111wp; YHR112c; Yhr112cp; YHR113w; Yhr113wp; YHR114w; Yhr114wp;
     YHR115c; Yhr115cp; YHR116w; Yhr116wp; TOM71; Tom71p: 71-kDa component of
     the protein translocase of the outer membrane of mitochondria; ORC6;
     Orc6p: 50kDa subunit of Origin Recognition Complex; SET1; Set1p; MSH1;
     Yhr120wp; YHR121w; Yhr121wp.

YSCH9177    U00029 U00093    56097bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid 9177.
    SCH9; Sch9p: cAMP-dependent protein kinase; SKN7; Skn7p; YHR207c;
     Yhr207cp; BAT1; Bat1p: Branched-Chain Amino Acid Transaminase; YHR209w;
     Yhr209wp; YHR210c; Yhr210cp; YHR211w; Yhr211wp; YHR212c; Yhr212cp;
     YHR213w; Yhr213wp; YHR214w; Yhr214wp; YHR214W-A; Yhr214w-ap; YHR214C-B;
     Yhr214c-bp; PHO12; Pho12p: acid phosphatase; YHR216w; Yhr216wp; YHR217c;
     Yhr217cp; YHR218w; Yhr218wp; YHR219w; Yhr219wp.

YSCH9205    U10556 U00093    39203bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid 9205.
    ERG7; Erg7p: 2,3-oxidosqualene-lanosterol cyclase; YHR073w; Yhr073wp;
     YHR074w; Yhr074wp; YHR075c; Yhr075cp; YHR076w; Yhr076wp; NMD2; Nmd2p:
     Protein involved in decay of mRNA containing nonsense codons; YHR078w;
     Yhr078wp; IRE1; Ire1p: Probable protein kinase; SAE3; Sae3p: Pachytene
     arrest protein; YHR080c; Yhr080cp; YHR081w; Yhr081wp; YHR082c; Yhr082cp;
     YHR083w; Yhr083wp; STE12; Yhr084wp; YHR085w; Yhr085wp.

YSCH9332    U00060 U00093    36176bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid 9332.
    NAM8; Nam8p: Putative RNA binding proteins; YHR087w; Yhr087wp; YHR088w;
     Yhr088wp; GAR1; Gar1p: Small nucleolar RNA protein required for pre-rRNA
     splicing; YHR090c; Yhr090cp; MSR1; Msr1p: Arginyl-tRNA synthetase; HXT4;
     Hxt4p: High-affinity glucose transporter; AHT1; Aht1p; HXT1; Hxt1p: High
     affinity hexose transporter; YHR095w; Yhr095wp; HXT5; Hxt5p: Hexose
     transporter; YHR097c; Yhr097cp; YHR098c; Yhr098cp; TRA1; Tra1p.

YSCH9666    U10397 U00093    39057bp    DNA      PLN      05-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid 9666.
    YHR142w; Yhr142wp; YHR143w; Yhr143wp; RPB12; Rpb12p: RNA polymerase II
     subunit; DCD1; Dcd1p: dCMP deaminase; tP(UGG)H; tRNA-Pro; YHR145C;
     Yhr145cp; YHR146w; Yhr146wp; MRPL6; MRPL6p: Mitochondrial ribosomal
     protein L6; YHR148w; Yhr148wp; YHR149c; Yhr149cp; YHR150w; Yhr150wp;
     YHR151c; Yhr151cp; SPO12; Spo12p: sporulation protein; SPO16; Spo16p:
     Early meiotic protein required for efficient spore formation; YHR154w;
     Yhr154wp; YHR155w; Yhr155wp; YHR156c; Yhr156cp; REC104; Rec104p: Meiotic
     recombination protein; YHR158c; Yhr158cp; YHR159w; Yhr159wp; YHR160c;
     Yhr160cp; YHR161c; Yhr161cp.

YSCHL2825   U10400 U00093    18715bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid L2825.
    SOD2; Sod2p: Superoxidase dismutase; YHR009c; Yhr009cp; RPL27; Rpl27p:
     Probable 60S ribosomal protein L27; YHR011w; Yhr011wp; VPS29; Vps29p:
     Protein involved in vacuolar protein sorting; ARD1; Ard1p: subunit of
     the major N alpha-acetyltransferase; SPO13; Spo13p: Meiosis-specific
     protein; tS(AGA)H; tRNA-Ser; tQ(UUG)H; tRNA-Gln; YHR015w; Yhr015wp;
     YSC84; Ysc84p; YSC83; Ysc83p; ARG4; Arg4p: Arginosuccinate lyase.

YSCHL5018   U11581 U00093    16274bp    DNA      PLN      04-SEP-1997
    Saccharomyces cerevisiae chromosome VIII cosmid L5018.
    YHL009c; Yhl009cp; tV(AAC)H; tRNA-Val; YHL008c; Yhl008cp; STE20; Ste20p:
     Protein kinase; component of the G-protein-coupled pheromone response
     pathway; YHL006c; Yhl006cp; YHL005c; Yhl005cp.

Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://ftp2.ddbj.nig.ac.jp:8000/cgi-bin/getent/



More information about the Yeast mailing list