New Saccharomyces Sequences 07/22/99

[biosci-request at net.bio.net]

====================== New DNA Sequences =======================

SCE244542   AJ244542      437bp    mRNA     PLN      01-JUL-1999
    Saccharomyces cerevisiae partial mRNA for 18S ribosomal RNA, isolate
     Scer71003.
    18S ribosomal RNA; 18S rRNA gene; 18S rRNA.

SC9910      Z46728 Z47047    25913bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome IX cosmid 9910.
    isocitrate dehydrogenase, isopropylmalatedelta element; GIN13; TY3-2
     orfA; TY3-2 orfB.

SCE244542   AJ244542      437bp    mRNA     PLN      01-JUL-1999
    Saccharomyces cerevisiae partial mRNA for 18S ribosomal RNA, isolate
     Scer71003.
    18S ribosomal RNA; 18S rRNA gene; 18S rRNA.

SCPDC114    X77311     1701bp    DNA      PLN      16-JUN-1999
    S.cerevisiae PDC1 gene, mutant pdc1-14.
    PDC1 gene; pyruvate decarboxylase; PDC1, allele pdc1-14.

SCPDC1802   X77314     1701bp    DNA      PLN      16-JUN-1999
    S.cerevisiae PDC1 gene, mutant pdc1-802.
    PDC1 gene; pyruvate decarboxylase; pdc1-802.

SCPDC1803   X77315     1695bp    DNA      PLN      16-JUN-1999
    S.cerevisiae PDC1 gene, mutant pdc1-803.
    PDC1 gene; pyruvate decarboxylase; PDC1, allele pdc1-803.

SCPDC18     X77312     1701bp    DNA      PLN      16-JUN-1999
    S.cerevisiae PDC1 gene, mutant pdc1-8.
    PDC1 gene; pyruvate decarboxylase; PDC1, allele pdc1-8.

SCU49845    U49845     5028bp    DNA      PLN      21-JUN-1999
    Saccharomyces cerevisiae TCP1-beta gene, partial cds; and Axl2p (AXL2)
     and Rev7p (REV7) genes, complete cds.
    TCP1-beta; AXL2; Axl2p; REV7; Rev7p.

SCYBR088C   Z35957 Y13134     1550bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome II reading frame ORF YBR088c.
    POL30; NHP6B.

SCYGL075C   Z72597 Y13135     3184bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome VII reading frame ORF YGL075c.
    RPL6A; SNR39B.

SCYGL209W   Z72731 Y13135     2876bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome VII reading frame ORF YGL209w.
    MIG2.

SCYGR127W   Z72912 Y13135     1466bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome VII reading frame ORF YGR127w.

SCYKR047W   Z28272 Y13137      488bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome XI reading frame ORF YKR047w.
    NAP1.

SCYLL064C   Z73169 Y13138     2600bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome XII reading frame ORF YLL064c.
    GIN11.

SCYLR027C   Z73199 Y13138     3177bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome XII reading frame ORF YLR027c.
    AAT2; SNR30; ADE16.

SCYNL181W   Z71457 Y13139     2034bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome XIV reading frame ORF YNL181w.

SCYNL336W   Z71612 Y13139     4061bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome XIV reading frame ORF YNL336w.
    COS1.

SCYOR014W   Z74922 Y13140     2986bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome XV reading frame ORF YOR014w.
    RTS1.

SCYOR223W   Z75131 Y13140     1635bp    DNA      PLN      24-JUN-1999
    S.cerevisiae chromosome XV reading frame ORF YOR223w.
    SNR35.

YSCCNB      D10293 D90502      732bp    mRNA     PLN      15-JUL-1999
    Saccharomyces cerevisiae mRNA for calcineurin B homolog, complete cds.
    regulatorycalcineurin B; calmodulin-dependent protein phosphatase;
     calcineurin B homolog.

YSCCOF      D13230     2005bp    DNA      PLN      29-JUN-1999
    Saccharomyces cerevisiae COF1 gene for cofilin, complete cds.
    cofilin; COF1.

YSCEIF5A    D83166      738bp    mRNA     PLN      18-JUN-1999
    Saccharomyces cerevisiae mRNA for eukaryotic translation initiation
     factor 5A, complete cds.
    translation initiation factor 5A; cycloheximide sensitivity factor;
     eIF-5A; eukaryotic translation initiation factor 5A precursor;
     eukaryotic translation initiation factor 5A.

YSCNRK1     D29980     4601bp    DNA      PLN      17-JUN-1999
    Yeast NRK1 gene for N-rich kinase 1, complete cds.
    ATP-binding; N-rich kinase 1; NRK-1.

YSCPRS3G    D00845     3325bp    DNA      PLN      23-JUN-1999
    S. cerevisiae PRS3 gene encoding proteasome subunit.
    proteasome subunit; PRS3.

YSCRER1     D28552     1147bp    DNA      PLN      19-JUN-1999
    Saccharomyces cerevisiae DNA for Rer1p, complete cds.
    Rer1p; membrane protein retention; RER1.

=========== Updated Sequence Features/Annotations  =============

YSCCAJ1     D21164     1364bp    mRNA     PLN      16-JUL-1999
    Saccharomyces cerevisiae mRNA for CAJ1 (a yeast homolog of DnaJ),
     complete cds.
    CAJ1; DnaJ; calmodulin-binding protein.

YSCSSE1G    D38370 D13910     1359bp    DNA      PLN      16-JUL-1999
    Saccharomyces cerevisiae SSE1 gene, partial cds.
    Sse1 protein; SSE1.

YSCSSE1M    D38368 D13908     2224bp    mRNA     PLN      16-JUL-1999
    Saccharomyces cerevisiae mRNA for Sse1 protein, complete cds.
    Sse1 protein.

YSCSSE2G    D38371 D13911     1016bp    DNA      PLN      16-JUL-1999
    Saccharomyces cerevisiae SSE2 gene, partial cds.
    Sse2 protein; SSE2.

YSCSSE2M    D38369 D13909     2240bp    mRNA     PLN      16-JUL-1999
    Saccharomyces cerevisiae mRNA for Sse2 protein, complete cds.
    Sse2 protein.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI query (Entrez)
e-mail server, query at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
     Only Yeast:  http://genome-www.stanford.edu/cgi-bin/genbank_search
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/embl/Access/index.html
           DDBJ:  http://www.ddbj.nig.ac.jp/searches-e.html






______________O_________oO_____________oO______o_______oO___________________
YEAST bionet newsgroup see: http://www.bio.net/hypermail/YEAST/
YEAST e-mail: messages sent to yeast at net.bio.net
subscribe: e-mail biosci-server at net.bio.net with: subscribe yeast
unsubscribe: e-mail biosci-server at net.bio.net with: unsubscribe yeast
YEAST on the WWW: http://genome-www.stanford.edu/Saccharomyces/VL-yeast.html
problems with the YEAST newsgroup? E-mail the moderator: francis at cmmt.ubc.ca