New Saccharomyces Sequences 07/04/01

SGD Sequences yeast-seq at genome.stanford.edu
Wed Jul 4 12:10:20 EST 2001


==================== Updated DNA Sequences =====================

AB057369    AB057369      113bp    DNA      PLN      29-JUN-2001
    Saccharomyces cerevisiae DNA, repeat sequence.

AX140044    AX140044     1833bp    DNA      PAT      30-MAY-2001
    Sequence 1 from Patent EP1099761.

AX140177    AX140177      861bp    DNA      PAT      31-MAY-2001
    Sequence 9 from Patent WO0134798.

AX140187    AX140187       34bp    DNA      PAT      31-MAY-2001
    Sequence 19 from Patent WO0134798.

AX140188    AX140188       33bp    DNA      PAT      31-MAY-2001
    Sequence 20 from Patent WO0134798.

AX146233    AX146233       17bp    DNA      PAT      31-MAY-2001
    Sequence 1 from Patent WO0134820.

AX147365    AX147365       23bp    DNA      PAT      08-JUN-2001
    Sequence 14 from Patent WO0136683.

AX147378    AX147378       22bp    DNA      PAT      08-JUN-2001
    Sequence 27 from Patent WO0136683.

AY033394    AY033394     1872bp    DNA      PLN      18-JUN-2001
    Saccharomyces cerevisiae Ama1p (AMA1) gene, partial cds.
    AMA1; Ama1p.

SCCHRIII    X59720 S43845 S49180 S58084 S93798   316613bp    DNA      PLN      29-JUN-2001
    S.cerevisiae chromosome III complete DNA sequence.
    chromosome; Ty5; pseudogene Ty5; TY5; TY5, putative; hypothetical
     protein; HMLALPHA2; mating type regulatory protein, silenced copy at
     HML; HMLALPHA1; CHA1; L-serine/L-threonine deaminase; KRR1; FYV5; PRD1;
     proteinase yscD; KAR4; regulatory protein; SPB1; putative methylase;
     PBN1; LRE1; APA1; ATP adenylyltransferase I; PDI1; protein
     disulfide-isomerase precursor; GLK1; aldohexose specific glucokinase;
     regulatory protein of the beta-transducin family; SRO9; La
     motif-containing protein; GRX1; glutaredoxin; STE50; pheromone response
     pathway protein; RRP7; HIS4; phosphoribosyl-AMP
     cyclohydrolase/phosphoribosyl-ATP; phosphoribosyl-AMP
     cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol
     dehydrogenase; BIK1; nuclear fusion protein; RNQ1; prion; FUS1; cell
     fusion protein; FRM2; AGP1; asparagine and glutamine permease; KCC4;
     kinase; tE(TTC)CL - systematic name; TY2A; TY2B; TY2A_C TY2A-TY2A
     protein; TY2B_C-TY2B protein; tL(CAA)CL - systematic name; LEU2;
     beta-isopropyl-malate dehydrogenase; NFS1; BUD3; budding protein; GBP2;
     potential telomere-associated protein; ILV6; acetolactate synthase,
     regulatory subunit; STP22; CWH36; SNR43; PGS1;
     phosphatidylglycerophosphate synthase; RER1; CDC10; cell division
     control protein; MRPL32; ribosomal protein YmL32, mitochondrial; YCP4;
     CIT2; citrate (si)-synthase, peroxisomal; tP(AGG)CR - systematic name;
     tN(GTT)CR - systematic name; SAT4; RVS161; ADY2; ADP1; ATP-dependent
     permease; PGK1; phosphoglycerate kinase; POL4; DNA polymerase; SNR33;
     tG(GCC)CR - systematic name; SRD1; nucleolar protein; tM(CAT)CR -
     systematic name; tK(CTT)CR - systematic name; MAK32; PET18; MAK31; HTL1;
     high temperature lethal; HSP30; heat shock protein; member of major
     facilitator superfamily multidrug-resistance protein family 2; asn-tRNA
     synthetase, mitochondrial; PMP1; H+-ATPase subunit, plasma membrane;
     RSG1; rheb-like protein; tQ(TTG)CR - systematic name; FEN2; RIM1;
     ssDNA-binding protein, mitochondrial; SNR65; RPS14A; 40S Ribosomal
     protein S14.e; SNR189; BPH1; FEN1; fatty acid elongase; RRP43; rRNA
     processing protein; RBK1; ribokinase; PHO87; member of the phosphate
     permease family; BUD5; GDP/GTP exchange factor for Rsr1p/Bud1p;
     MATALPHA2; mating type regulatory protein, expressed copy at MAT locus;
     MATALPHA1; TSM1; component of TFIID complex; PER1; IMG1; ribosomal
     protein, mitochondrial; BUD23; putative methyltransferase; ARE1;
     acyl-CoA sterol acyltransferase; RSC6; subunit of the RSC complex; THR4;
     threonine synthase (o-p-homoserine p-lyase); CTR86; PWP2; periodic
     tryptophan protein; YIH1; tS(CGA)CR - systematic name; BUD31; HCM1;
     transcription factor; RAD18; DNA repair protein; SED4; protein of the
     endoplasmic reticulum; CVT17; SCC3; peptidyl-prolyl cis-trans isomerase
     precursor; IMG2; beta-transducin family (WD-40 repeat) protein; SSK22;
     MAP kinase kinase kinase; SOL2; multicopy suppressor of los1-1; ERS1;
     intracellular protein transport protein; PAT1; topoisomerase
     II-associated protein; SRB8; DNA-directed RNA polymerase II holoenzyme
     and Srb10 CDK subcomplex subunit; TRX3; mitochondrial thioredoxin; TUP1;
     general transcription repressor; CSM1; nucleic acid-binding protein;
     ABP1; actin-binding protein; FIG2; KIN82; ser/thr protein kinase; MSH3;
     DNA mismatch repair protein; CDC39; nuclear protein; CDC50; cell
     division cycle mutant; A2; mating type regulatory protein, silenced copy
     at HMR locus; A1; -hypothetical protein; tT(AGT)CR - systematic name;
     GIT1; GIT1-glycerophosphoinositol transporter; PAU3; AAD3; hypotetical
     aryl-alcohol dehydrogenase.

SCE318331   AJ318331     4061bp    DNA      PLN      19-JUN-2001
    Saccharomyces cerevisiae SAP155 gene for Sit4p phosphatase-associated
     protein.
    SAP155 gene; Sit4p phosphatase-associated protein; SAP155.

SCXYKA      X61377     2467bp    DNA      PLN      22-MAY-2001
    S.cerevisiae XYK gene for xylulokinase.
    xylulokinase; XYK.

SRNORF      M64034     2479bp    ss-RNA   PLN      05-JUN-2001
    Saccharomyces cerevisiae 20S RNA replicon partial sequence.
    RNA polymerase; putative RNA polymerase.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI query (Entrez)
e-mail server, query at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Genbank/GenbankSearch.html
     EBI (EMBL):  http://www.ebi.ac.uk/embl/Access/index.html
           DDBJ:  http://www.ddbj.nig.ac.jp/searches-e.html

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