New Saccharomyces Sequences 02/09/02

SGD Sequences yeast-seq at genome.stanford.edu
Sun Feb 10 01:02:09 EST 2002


====================== New DNA Sequences =======================

107 new entries are present in the Patent section.  This are typically
very short sequences.  These sequences are included in the datasets at
SGD.  The titles don't define the sequence so I've removed them from
this message. -Mike

=========== Updated Sequence Features/Annotations  =============

YSCC14SRTS  M99419 S49653     2409bp    DNA      linear   PLN
    Saccharomyces cerevisiae sterol C-14 reductase (ERG24) gene, complete
     cds.
    C-14 sterol reductase.

YSCGPD1     M38740 M74328     1803bp    DNA      linear   PLN
    Saccharomyces cerevisiae glycerol-3-phosphate dehydrogenase (GPD1) gene,
     partial cds.
    glycerol-3-phosphate dehydrogenase; tRNA-Ala; GPD1; cytoplasmic
     NAD-linked glycerol-3-phosphate dehydrogenase.

YSCKSUP     M17302 M28272      131bp    DNA      linear   PLN
    Saccharomyces cerevisiae Leu-tRNA gene, partial sequence.
    transfer RNA; transfer RNA-Leu; tRNA-Leu.

YSCMTTRSB   K02230 K00274       90bp    tRNA     linear   PLN
    Saccharomyces cerevisiae, Serine tRNA 2 sequence.
    transfer RNA; transfer RNA-Ser; tRNA-Ser.

YSCTGYSR1   M15430     1250bp    DNA      linear   PLN
    Saccharomyces cerevisiae SUP4 DNA region containing Ty target sites,
     delta regions 1 and 2, and encoding Arg-tRNA.
    Ty transposon; delta-element; long terminal repeat; transfer RNA;
     transfer RNA-Arg; tRNA-Arg.

YSCTGYSR2   M15431     1389bp    DNA      linear   PLN
    Saccharomyces cerevisiae SUP4 DNA region containing Ty target sites and
     delta elements.
    Ty transposon; delta-element; long terminal repeat.

YSCTGYSR3   M15468 M28198     2258bp    DNA      linear   PLN
    Saccharomyces cerevisiae SUP4-o gene, CDC8 gene, and delta element 5,
     encoding respectively ochre-suppressing Tyr-tRNA, and thymidylate kinase
     (replication control protein) control protein.
    delta-element; ochre suppressor; replication; suppressor; thymidylate
     kinase; transfer RNA; transfer RNA-Tyr; Tyr-tRNA; tRNA-Tyr.

YSCTRL3     K00228 K02005       85bp    tRNA     linear   PLN
    Saccharomyces cerevisiae, Leucine tRNA 3 sequence.
    transfer RNA; transfer RNA-Leu; tRNA-Leu.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI query (Entrez)
e-mail server, query at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Genbank/GenbankSearch.html
     EBI (EMBL):  http://www.ebi.ac.uk/embl/Access/index.html
           DDBJ:  http://www.ddbj.nig.ac.jp/searches-e.html

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