New Saccharomyces Sequences 02/13/02

SGD Sequences yeast-seq at genome.stanford.edu
Wed Feb 13 21:50:37 EST 2002


=========== Updated Sequence Features/Annotations  =============

YSCC14SRTS  M99419 S49653     2409bp    DNA      linear   PLN
    Saccharomyces cerevisiae sterol C-14 reductase (ERG24) gene, complete
     cds.
    C-14 sterol reductase.

YSCGPD1     M38740 M74328     1803bp    DNA      linear   PLN
    Saccharomyces cerevisiae tRNA-Ala gene, complete sequence; and
     cytoplasmic NAD-linked glycerol-3-phosphate dehydrogenase (GPD1),
     partial cds.
    glycerol-3-phosphate dehydrogenase; tRNA-Ala; GPD1; cytoplasmic
     NAD-linked glycerol-3-phosphate dehydrogenase.

YSCMTCG01   L36885 M62622      907bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion 21S R2 ribosomal RNA, 3' end.
    21S R2 ribosomal RNA.

YSCMTCG02   L36886 M62622     1816bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA-Thr2 (tRNA-Thr2);
     transfer RNA-Cys (tRNA-Cys); transfer RNA-His (tRNA-His) genes.
    tRNA-Thr; tRNA-Cys; tRNA-His.

YSCMTCG03   L36887 M62622     6340bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA- Leu, Gln, Lys, Arg,
     Gly, Asp, Ser2, Arg2, Ala, Ile, Tyr, Asn genes.
    tRNA-Leu; tRNA-Gln; tRNA-Lys; tRNA-Arg; tRNA-Gly; tRNA-Asp; tRNA-Ser;
     tRNA-Ala; tRNA-Ile; tRNA-Tyr; tRNA-Asn.

YSCMTCG04   L36888 M62622     3804bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA-Met (tRNA-Met) gene,
     oxiI gene, and ORF1.
    tRNA-Met; oxiI.

YSCMTCG05   L36889 M62622      370bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA-Phe (tRNA-Phe) gene.
    tRNA-Phe.

YSCMTCG06   L36890 M62622     6591bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA-Thr1 (tRNA-Thr) gene;
     transfer RNA-Val (tRNA-Val) gene; oxi2 gene, complete cds; ORF2 and
     origin of replication (ori5).
    tRNA-Thr; tRNA-Val; oxi2.

YSCMTCG07   L36891 M62622     2606bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA-fMet (tRNA-fMet)
     gene; transfer RNA-Pro (tRNA-Pro) gene; 9S ribosomal RNA (9S rRNA) gene.
    tRNA-Met; 9S ribosomal RNA; tRNA-Pro.

YSCMTCG08   L36892 M62622      802bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion DNA segment.

YSCMTCG09   L36893 M62622     1215bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion origin of replication (oriI).

YSCMTCG10   L36894 M62622      481bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion DNA segment.

YSCMTCG11   L36895 M62622     4350bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion 15S ribosomal RNA (15S rRNA) gene;
     ORF3; transfer RNA-Trp (tRNA-Trp) gene.
    15S ribosomal RNA; tRNA-Trp.

YSCMTCG12   L36896 M62622     1497bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion origin of replication (ori8).

YSCMTCG13   L36897 M62622    21153bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion oxi3 gene, aapI gene, oli2 gene,
     ORF4, replication of origin (ori7 and ori2), and ORF5.
    oxi3; aapI; oli2.

YSCMTCG14   L36898 M62622     5321bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA-Glu (tRNA-Glu) gene.
    tRNA-Glu.

YSCMTCG15   L36899 M62622     8316bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion origin of replication (ori6) and
     oli1 gene, complete cds.
    oli1.

YSCMTCG16   L36900 M62622     3542bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion transfer RNA-Ser1 (tRNA-Ser) gene
     and varI gene, complete cds.
    tRNA-Ser; varI.

YSCMTCG17   L36901 M62622     1748bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion DNA segment.

YSCMTCG18   L36902 M62622     2858bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion origin of replication (ori3 and
     ori4).

YSCMTCG19   L36903 M62622     4785bp    DNA      linear   PLN
    Saccharomyces cerevisiae mitochondrion 21S ribosomal RNA (21S rRNA) gene,
     21S R2 ribosomal RNA (21S R2 rRNA) gene, and ORF RI.
    21S ribosomal RNA; 21S R2 ribosomal RNA.


Please note that new sequences take about a week to appear in SGD.  To
obtain any of the yeast GenBank sequences use the NCBI query (Entrez)
e-mail server, query at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web links for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Saccharomyces/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Genbank/GenbankSearch.html
     EBI (EMBL):  http://www.ebi.ac.uk/embl/Access/index.html
           DDBJ:  http://www.ddbj.nig.ac.jp/searches-e.html

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