[Yeast] Yeast proteins with cysteines
(by maria from genome.stanford.edu)
Fri Aug 10 08:49:14 EST 2007
THe Saccharomyces Genome Database (SGD) contains gene and protein
information for S. cerevisiae and provides multiple files for
download. The one you are looking for would be the file
'protein_properties.tab' which can be downloaded at:
This file contains information on the amino acid composition of each
yeast protein, and you should be able to sort it in Excel to identify
the proteins containing cysteines. The format and content of the file
are described in the 'README' file located in the same FTP directory.
Please let me know if you have further questions.
Maria C. Costanzo, Ph.D.
Senior Scientific Curator, Saccharomyces Genome Database
and Candida Genome Database
Department of Genetics
Stanford University School of Medicine
Stanford, CA 94305-5120
maria from genome.stanford.edu
On Aug 9, 2007, at 8:13 PM, Nicolas Brandes wrote:
> Hi all,
> Is there a database out with all the yeast proteins that contain
> cysteines? If not, what might be the best way to look for them?
> Screen all proteins for cysteines this would take a lot of time.
> Any ideas or suggestions?
> Nicolas Brandes
> University of Michigan
> Department of MCDB
> Yeast mailing list
> Yeast from net.bio.net
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