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Dear Cindy,<br>
<br>
The Saccharomyces Genome Database (SGD; <a class="moz-txt-link-freetext" href="http://www.yeastgenome.org/">http://www.yeastgenome.org/</a>)
has a file available for download that lists yeast genes with their
BLASTP best hits from several other organisms, including human. The
file is called 'best_hits.tab' and may be downloaded from this
directory of our FTP site:<br>
<br>
<a class="moz-txt-link-freetext" href="ftp://genome-ftp.stanford.edu/pub/yeast/sequence_similarity/best_hits/">ftp://genome-ftp.stanford.edu/pub/yeast/sequence_similarity/best_hits/</a><br>
<br>
There is a 'README' document in this directory that describes the
contents and format of the file.<br>
<br>
I hope this is helpful; please let me know if you have further
questions.<br>
<br>
Best regards,<br>
Maria<br>
<pre class="moz-signature" cols="72">Maria C. Costanzo, Ph.D.
Senior Scientific Curator, Saccharomyces Genome Database
and Candida Genome Database
Department of Genetics
Stanford University School of Medicine
Stanford, CA 94305-5120
Phone: 650-725-8956
Fax: 650-725-1534
<a class="moz-txt-link-freetext" href="http://www.yeastgenome.org/">http://www.yeastgenome.org/</a>
<a class="moz-txt-link-freetext" href="http://www.candidagenome.org/">http://www.candidagenome.org/</a>
<a class="moz-txt-link-abbreviated" href="mailto:maria@genome.stanford.edu">maria@genome.stanford.edu</a>
</pre>
<br>
<br>
Shaoyu Wang wrote:
<blockquote
cite="mid:FB4F123E1A1345488DC47F54B12592365BAFBA@VIOLA.AD.UWS.EDU.AU"
type="cite">
<pre wrap="">Dear All,
I need to find human homologe genes of a list of yeast genes. I know how to get human homologe gene one by one but this is tedious if you have say 50 genes to do. I wonder is there any tool we can use to find list of homologe genes at one go?
Thank you for your help.
Cheers
Cindy
________________________________
From: <a class="moz-txt-link-abbreviated" href="mailto:yeast-bounces@oat.bio.indiana.edu">yeast-bounces@oat.bio.indiana.edu</a> on behalf of <a class="moz-txt-link-abbreviated" href="mailto:yeast-request@oat.bio.indiana.edu">yeast-request@oat.bio.indiana.edu</a>
Sent: Sun 27/01/2008 4:04 AM
To: <a class="moz-txt-link-abbreviated" href="mailto:yeast@magpie.bio.indiana.edu">yeast@magpie.bio.indiana.edu</a>
Subject: Yeast Digest, Vol 32, Issue 6
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Today's Topics:
1. Re: Unwanted digestion of solubilized membrane proteins.
(Martin Kampmann)
Message: 1
Date: Fri, 25 Jan 2008 12:28:42 -0500
From: Martin Kampmann <a class="moz-txt-link-rfc2396E" href="mailto:Martin.Kampmann@mail.rockefeller.edu"><Martin.Kampmann@mail.rockefeller.edu></a>
Subject: [Yeast] Re: Unwanted digestion of solubilized membrane
proteins.
To: <a class="moz-txt-link-abbreviated" href="mailto:yeast@oat.bio.indiana.edu">yeast@oat.bio.indiana.edu</a>
Message-ID: <a class="moz-txt-link-rfc2396E" href="mailto:4CBFABEC-9562-40F2-80A7-3F8C3145C39A@rockefeller.edu"><4CBFABEC-9562-40F2-80A7-3F8C3145C39A@rockefeller.edu></a>
Content-Type: text/plain; charset=US-ASCII; delsp=yes; format=flowed
Hi Linnea,
Degradation may occur during your 1 hour solubilization step.
Maybe you could try to do 10 minutes of solubilization before the
clearing step, and then analyze your sample directly after clearing?
Best,
Martin
On Jan 25, 2008, at 12:07 PM, <a class="moz-txt-link-abbreviated" href="mailto:yeast-request@oat.bio.indiana.edu">yeast-request@oat.bio.indiana.edu</a> wrote:
</pre>
<blockquote type="cite">
<pre wrap="">Send Yeast mailing list submissions to
<a class="moz-txt-link-abbreviated" href="mailto:yeast@net.bio.net">yeast@net.bio.net</a>
To subscribe or unsubscribe via the World Wide Web, visit
<a class="moz-txt-link-freetext" href="http://www.bio.net/biomail/listinfo/yeast">http://www.bio.net/biomail/listinfo/yeast</a>
or, via email, send a message with subject or body 'help' to
<a class="moz-txt-link-abbreviated" href="mailto:yeast-request@net.bio.net">yeast-request@net.bio.net</a>
You can reach the person managing the list at
<a class="moz-txt-link-abbreviated" href="mailto:yeast-owner@net.bio.net">yeast-owner@net.bio.net</a>
When replying, please edit your Subject line so it is more specific
than "Re: Contents of Yeast digest..."
Today's Topics:
1. Unwanted digestion of solubilized membrane proteins.
(Linnea Hedin)
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</pre>
</blockquote>
<pre wrap=""><!---->
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