Subject: [Zbrafish] Software for DNA/Protein analysis
Chi-Bin Chien
via zbrafish%40net.bio.net
(by chi-bin.chien from neuro.utah.edu)
Tue Oct 19 15:11:32 EST 2010
Okay, I should correct my previous post. Sequencher plus ApE do all of
my day-to-day work. I use Sequencher for analyzing raw sequence files,
ApE for designing subcloning and making maps.
Chi-Bin Chien
< Dept. Neurobiology and Anatomy | office: 1-801-585-1701 >
< Univ. Utah Medical Center | lab: 1-801-585-1702 >
< 20 North 1900 East, 401 MREB | fax: 1-801-581-4233 >
< Salt Lake City, UT 84132 | chi-bin.chien from neuro.utah.edu >
< http://chien.neuro.utah.edu >
On Oct 19, 2010, at 12:47 PM, Sood, Raman (NIH/NHGRI) [E] wrote:
> I agree with Wilson. Sequencher is great for most of the DNA
> sequence analysis. I use Macvector for protein analysis and it can
> also be set-up as a networked license by the Instittute.
> Raman
>
> -- Raman Sood
> Associate Investigator
> Director, Zebrafish Core facility
> National Human Genome Research Institute
> National Institutes of Health
> 49 Convent Dr., MSC4442
> Bldg 49, room 3A30
> Bethesda, MD 20892
> Phone: 301-435-5746
> Fax: 301-402-4929
> Web: genome.gov/Staff/Sood
>
>
>
>
>
> On 10/19/10 1:57 PM, "Wilson Clements" <wclements from ucsd.edu> wrote:
>
> Dear Rebecca,
>
> It's not cheap, and the protein analysis is limited, but I would
> highly, highly recommend Sequencher, from GeneCodes Corp. Many
> universities provide networked licenses for client/server use.
> Princeton seems like a high percentage place to do that. I do all my
> analysis on Sequencher; it's easy, intuitive, and powerful.
>
> Best,
> Wilson
> --------------------------------------------------------------------------------------------
> Wilson Clements, Ph.D.
>
> wclements from ucsd.edu
>
> Dept. of Biology
> Section of Cell and Developmental Biology
> University of California at San Diego
> 9500 Gilman Dr.
> Natural Sciences Building 6105
> La Jolla, CA 92093-0380
>
> TEL (858) 534-6955
> LAB (858) 822-4658
> FAX (858) 822-5740
>
>
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