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Tim Clark clark at mpi.com
Thu Jul 30 13:43:37 EST 1998


Please remove me from your email list asap.

Tim Clark

>X-Authentication-Warning: gatekeeper.mpi.com: news set sender to
<jmalicki at guarneri.curagen.com> using -f
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>Date: Thu, 30 Jul 1998 13:41:41 -0400
>To: "Meslin, Eric (OD)" <MeslinE at OD.NIH.GOV>,
>        "'Douglas Bonar'" <bonard at ms.com>,
Nina.Patel at us.nycomed-amersham.com,
>        recomb-email-list at cs.sandia.gov, scistra at frodo2.cs.sandia.gov
>From: Jannine Malicki <jmalicki at curagen.com>
>Subject: RE: Call for Papers (Deadline Extension)
>
>Remove me from the list...I'm getting spammed like crazy from everyone who
>wants to be removed as well...thanks
>
>At 01:24 PM 7/30/98 -0400, Meslin, Eric (OD) wrote:
>>Please remove me from your list.
>>
>>Eric M. Meslin, Ph.D
>>Executive Director
>>National Bioethics Advisory Commission
>>6100 Executive Blvd. Suite 5B01
>>Rockville, Maryland  20892-7508
>>Tel:  (301) 402-4242
>>Fax: (301) 480-6900
>>Email: MeslinE at OD.NIH.GOV
>>http://www.bioethics.gov
>>
>>	-----Original Message-----
>>	From:	Douglas Bonar [SMTP:bonard at ms.com]
>>	Sent:	Thursday, July 30, 1998 1:03 PM
>>	To:	Nina.Patel at us.nycomed-amersham.com;
>>recomb-email-list at cs.sandia.gov; scistra at frodo2.cs.sandia.gov
>>	Subject:	Re: Call for Papers (Deadline Extension)
>>
>>
>>	Please remove me from your email list.  I don't have anything to 
>>	do with your subscriptions to the DIMACS mailing lists.
>>
>>
>>	On Jul 30, 11:50am, Nina Patel wrote:
>>	> Subject: Re: Call for Papers (Deadline Extension)
>>	>      Please remove my name from your e-mail list; I am no longer with
>>this 
>>	>      employer after July 31
>>	>      Thank you,
>>	>      Nina Patel
>>	> 
>>	> 
>>	> ______________________________ Reply Separator
>>	_________________________________
>>	> Subject: Call for Papers (Deadline Extension)
>>	> Author:  scistra at frodo2.cs.sandia.gov (Sorin C. Istrail) at Internet
>>	> Date:    7/28/98 6:08 PM
>>	> 
>>	> 
>>	>      
>>	>         DISCRETE APPLIED MATHEMATICS
>>	>      
>>	>           CALL FOR PAPERS FOR THE 
>>	>      
>>	>     COMPUTATIONAL MOLECULAR BIOLOGY SERIES
>>	>      
>>	>      
>>	> We are happy to announce that our collection of Special Issues on 
>>	> Computational Molecular Biology has become the 
>>	> <<Computational Molecular Biology Series>>, 
>>	> an ongoing regular feature of "Discrete Applied Mathemtaics".
>>	>      
>>	> Series Editors: Sorin Istrail, Pavel Pevzner, Ron Shamir
>>	>      
>>	> Submission Deadline for the next volume: September 1, 1998
>>	>      
>>	>      
>>	>      "Don't ask [only] what mathematics can do for biology, 
>>	>        ask what biology can do for mathematics."
>>	>      
>>	>               Stanislaw Ulam
>>	>      
>>	>      
>>	> Manuscripts are solicited for a volume of "Discrete Applied
>>Mathematics" 
>>	> on topics concerning the development of new combinatorial and 
>>	> algorithmic techniques in computational molecular biology. This volume
>>
>>	> will be the third in the Computational Molecular Biology Series of 
>>	> Discrete Applied Mathematics, which publishes papers on the
>>mathematical 
>>	> and algorithmic foundations of the inherently discrete aspects of 
>>	> computational biology. The refereeing of the papers in this series
>>will 
>>	> be thorough and will follow the general pattern of refereeing of
>>regular 
>>	> papers in the journal.
>>	>      
>>	> The traditional partnership of mathematics and physics has advanced 
>>	> and enriched both disciplines. In a similar partnership, mathematics 
>>	> and algorithms are becoming crucial tools in the rapid advancement of 
>>	> molecular biology. At the same time, the computational challenges of 
>>	> these biological disciplines raise exciting new problems in discrete 
>>	> mathematics and theoretical computer science.
>>	>      
>>	> The following is a (non-exhaustive) list of possible topics of 
>>	> interest for the series: 
>>	>      
>>	> DNA mapping
>>	> DNA sequencing 
>>	> DNA/protein sequence comparison 
>>	> Molecular evolution
>>	> RNA/Protein folding and structure prediction 
>>	> Gene/motif recognition
>>	> Genome rearrangements 
>>	> Gene function determination
>>	> Drug design and combinatorial chemistry 
>>	> DNA arrays 
>>	>      
>>	> The response to the first two calls for papers in this series 
>>	> was very strong, and resulted in two high quality volumes; 
>>	> the first appeared in 1996 (Discrete Applied Mathematics, Volume 71), 
>>	> and the second will appear later this year. (A list of 
>>	> papers accepted to the second volume is attached to this message.)
>>	>      
>>	> In view of the success and strong response for these two volumes, 
>>	> the Editor-in-Chief of Discrete Applied Mathematics and the 
>>	> special volumes guest editors have decided to create an ongoing 
>>	> series of the journal, the Computational Molecular Biology Series.  
>>	> The Series Editors will continue to assure a thorough and timely 
>>	> refereeing process. We expect this third volume in the series to 
>>	> appear in the Fall 1999.
>>	>      
>>	> Seven (7) hard copies of complete manuscripts should be sent to any of
>>
>>	> the series editors by September 1, 1998. Manuscripts may be submitted 
>>	> earlier and their refereeing process will be initiated upon
>>submission. 
>>	> The submission should be accompanied by an email message containing
>>only 
>>	> the plain text (ASCII) of the abstract of the paper. Authors are 
>>	> encouraged to send also a LaTex or postscript file of the manuscript
>>via 
>>	> email, to expedite the reviewing process. This does not replace the
>>need 
>>	> for hard copy submission. Manuscripts must be prepared according to
>>the 
>>	> normal submission requirements of Discrete Applied Mathematics, as 
>>	> described in each issue of the journal. 
>>	>      
>>	> Further information on the series is available from:
>>	>      
>>	> http://www.elsevier.nl/mcs/dam/Menu.html (The Netherlands) 
>>	> http://www.cs.sandia.gov/~scistra/DAM (USA) 
>>	> http://www.math.tau.ac.il/~shamir/dcb.html (Israel)
>>	>      
>>	>      
>>	> The Series Editors are:
>>	> -----------------------
>>	>      
>>	>   Sorin Istrail
>>	>   Sandia National Laboratories
>>	>   Massively Parallel Computing Research Laboratory 
>>	>   P.O.Box 5800, MS 1110
>>	>   Albuquerque, NM 87185-5800
>>	>   scistra at cs.sandia.gov
>>	>   http: //www.cs.sandia.gov/~scistra
>>	>      
>>	>   Pavel Pevzner
>>	>   University of Southern California
>>	>   Department of Mathematics, DRB 155
>>	>   Los Angeles, CA 90089-1113
>>	>   ppevzner at hto.usc.edu
>>	>   http: //www-hto.usc.edu/people/Pevzner.html
>>	>      
>>	>   Ron Shamir 
>>	>   Department of Computer Science 
>>	>   School of Mathematical Sciences
>>	>   Tel Aviv University 
>>	>   Tel Aviv 69978
>>	>   ISRAEL  
>>	>   shamir at math.tau.ac.il
>>	>   http: //www.math.tau.ac.il/~shamir
>>	>      
>>	> -----------------------------------------------------------
>>	>  Papers Accepted to the Second Volume of
>>	>      
>>	>      DISCRETE APPLIED MATHEMATICS 
>>	>                  on
>>	>      COMPUTATIONAL MOLECULAR BIOLOGY
>>	>      
>>	> F. Annexstein, R. Swaminathan
>>	> "On testing consecutive ones property in parallel"
>>	>      
>>	> C. Armen, C. Stein
>>	> "A 2 and 3/4 approximation algorithm for the shortest superstring
>>problem"
>>	>      
>>	> B. DasGupta, T.Jiang, S.Kannan, M. Li, Z. Sweedyk
>>	> "On the complexity of approximation of syntenic distance"
>>	>      
>>	> H. Edelsbrunner, M. Facello, J. Liang
>>	> "On the definition and the construction of pockets in macromolecules"
>>	>      
>>	> O. Eulenstein, M. Vingron
>>	> "On the equivalence of two tree mapping measures"
>>	>      
>>	> D. Fernandez-Baca, J. Lagergren
>>	> "On the approximability of the Steiner tree problem in phylogeny"
>>	>      
>>	> I. Grebinsky, G. Kucherov
>>	> "Reconstructing a hamiltonian circuit by querying the graph:
>>	>  application to DNA physical mapping"
>>	>      
>>	> D. Gusfield, R. M. Karp, L. Wang, P. Stelling 
>>	> "Graph traversals, genes and matroids: an efficient 
>>	> case of the traveling salesman problem"
>>	>      
>>	> L. Heath, J. Vergara
>>	> "Sorting by bounded block-moves"
>>	>      
>>	> I. Hofacker, P. Schuster, P. Stadler 
>>	> "Combinatorics of RNA secondary structures"
>>	>      
>>	> J. Kececiouglu, D.Gusfield
>>	> "Reconstructing a history of recombinations from a set of sequences"
>>	>      
>>	> E. Knill, W. Bruno, D. Torney
>>	> "Non-adaptive group testing in the presence of errors"
>>	>      
>>	> G. Lancia, M. Perlin
>>	> "Genotyping of pooled microsatellite markers by combinatorial 
>>	> optimization techniques"
>>	>      
>>	> F.R. McMorris, C. Wang, P. Zhang  
>>	> "On probe interval graphs"
>>	>      
>>	> J. Miedanis, O. Porto, G.P. Telles
>>	> "On the consecutive Ones  Property"
>>	>      
>>	> R. Ravi, J. Kececiouglu
>>	> "Approximation algorithms for multiple sequence alignment under a 
>>	> fixed evolutionary tree"
>>	>      
>>	> M. Steel, M.D. Hendy, D. Penny
>>	> "Reconstructing phylogenies from nucleotide pattern probabilities"
>>	>      
>>	> -----------------------------------------------------------
>>	>      
>>	>      
>>	>      
>>	>      
>>	>      
>>	>-- End of excerpt from Nina Patel
>>
>>
>
>



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