In <31AEDF38.5DEB at biomira.com> Fred Jacobs <f_jacobs at biomira.com> writes:
>I'm looking for some software or 'net resources that can be used to
>predict human T-cell epitope sequences from peptides or proteins.
>There is a site at Brown University
>(http://www.brown.edu/Research/TB-HIV_lab/EpiRequisition.html) which
>will do the search for you when they have time. My understanding is
>that they are still building their site/software. Are ther any other
>sites or available software packages?
WEHI has a database of T cell peptides (actually, I think there are 3
databases: all described T cell peptides; consensus epitopes; and
references). You can get it by ftp or web from somewhere in
wehi.edu.au.
If you have a specific MHC in mind, you can look up the consensus sequence
for it.
--
Tom Thatcher | You can give a PC to a Homo habilis,
University of Rochester Cancer Center | and he'll use it, but he'll use it
ttha at uhura.cc.rochester.edu | to crack nuts.
