[Arabidopsis] forum question about yeast-one-hybrid
Inge De Clercq
via arab-gen%40net.bio.net
(by incle from psb.ugent.be)
Tue Sep 30 04:13:12 EST 2008
subject: _yeast-one-hybrid beta-galactosidase assay
_Dear all,
I am performing a yeast one hybrid screen according the protocol of
Deplancke with histidin and beta-galactosidase selection. After
screening with a cDNA library, I picked up some colonies on medium
lacking histidin + a concentration of 3-AT at which the strain does not
self-activate. I retested these positives on a new plate with the same
composition: a few colonies could not grow (which seems to me a
negative control that is ok), but others again growed well, even a
higher concentration of 3-AT... So, it seems to me that there s nothing
wrong with this first test.
The problem is that all these colonies don't give blue color after
performing the beta-gal assay (protocol according to deplancke, 2006 and
clontech: colony-lift filter assay). I tried already multiple times.
Does someone have an idea what could be wrong? The construct containing
the LacZ gene is ok: confirmed with PCR, and some strains were blue
during testing the self activation in the beginning. Could it be that
maybe my not-self activating strain (that i selected for performing the
screen) is contaminated with neighboring colonies at my master plate
that were self activating, and that the colonies that i picked up after
my screen are just self activating colonies instead of positive
transformants?
Many thanks in advance...
greetings,
Inge
More information about the Arab-gen
mailing list