markers between AThSO191 and DFR
huala at acoma.Stanford.EDU
Mon Oct 11 15:08:43 EST 1999
If you would like to design some PCR markers of your own in
this region, TAIR (formerly AtDB) has information on simple
sequence repeats and flanking DNA that can be used to design
your own primers and test for polymorphism. To access the
information, go to the Sequence Map at
and enter a marker in the search box (such as DFR). From
the closeup page centered around the chosen marker, you
can go to the Sequence Table by clicking on Arabidopsis
Sequence Table below the legend. This will take you to
the relevant section of the sequence table, where you will
find runs of A, T, TA and GA at least 30 nt long. If you
click on the simple repeat you will be able to view the
repeat with 200 nt of flanking DNA useful for designing
your own SSLP primers.
TAIR Head Curator
On Sun, 10 Oct 1999, Sridhar Venkataraman wrote:
> Dear Netters,
> I would like some PCR markers for Ler/Col between AthSO191 and DFR on
> Chromosome 5 of Arabidopsis.
> Any help will be appreciated.
> Home and lab address:
> Sridhar Venkataraman phone : 24 hours : 517-353-3519 (work)
> DOE-Plant Research Laboratory godly hours : 517-355-1266 (home)
> 122 Plant Biology Building
> Wilson Road,
> Michigan State University fax : 517-353-9168
> East Lansing , 48824-1312 e-mail : venkata1 at pilot.msu.edu
> Murphy's law # 24 : If you don't finish your work in 24 hours, work nights.
> Having a smoking section in a restaurant is a little like having a peeing
> section in a swimming pool!
> "After all, it's their money." Former U.S. President George Bush
> some of federal government's budget surplus should be returned to the
> NewsWeek March 22,1999.
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