[Bio-software] Re: Local BLAST

Tim Cutts timc at chiark.greenend.org.uk
Sat Oct 15 04:00:08 EST 2005


In article <mailman.6.1129307600.29584.bio-soft at net.bio.net>,
Julie Huxley - Jones  <j.huxley-jones at postgrad.manchester.ac.uk> wrote:
>Hi
>
>Has anyone had the following problem when running blast?
>
>"Segmentation Fault"
>or
>"Segmentation fault (core dumped)"
>
>My memory is unlimited and I don't think that it is the computer error.

This isn't nearly enough information for us to help you.  What sort of
computer system, running what operating system?  Which version of BLAST
(Wash-U, NCBI or other)?  Exactly what was the command line you used?
Have you checked that your query FASTA sequence is correctly formatted?

Tim



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