recent sequences, part 3

Elizabeth Harris chlamy at acpub.duke.edu
Tue Jan 27 17:04:42 EST 1998


LOCUS       AF034201      616 bp    mRNA            PLN       27-NOV-1997
DEFINITION  Dunaliella tertiolecta proliferating cell nuclear antigen (PCNA)
            mRNA, partial cds.
ACCESSION   AF034201
NID         g2645974
SOURCE      Dunaliella tertiolecta.



LOCUS       HPBCC4OXY    1771 bp    RNA             PLN       30-NOV-1997
DEFINITION  H.pluvialis mRNA for beta-carotene C-4 oxygenase.
ACCESSION   X86782
NID         g2654317
KEYWORDS    beta-carotene C-4 oxygenase; CrtO gene; ketolase.
SOURCE      Haematococcus pluvialis.



GenBank accession numbers AB009085 through AB009168 are all ESTs from
Chlamydomonas strain W80, a halotolerant species.  This is work by
Kanaboshi et al., unpublished.  Each file contains the following comment:
"The cDNA clone was isolated from the halotolerant green alga Chlamydomonas
W80 by a functional expression screening in E. coli cells. The principle of
the screening method was based on the acquirement of stress tolerance of
the bacterial cells carrying the cDNA."  I have listed here the citations
only for ones for which some identification was made.

LOCUS       AB009085      465 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009085
NID         g2662186
KEYWORDS    EST.
SOURCE      Chlamydomonas sp. (strain:W80) cDNA to mRNA, clone_lib:lambda ZAP
            II.
                     /note="similar to polyubiquitin"


LOCUS       AB009086      719 bp    mRNA            PLN       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA for BBC1 protein, complete cds.
ACCESSION   AB009086
NID         g2662187
KEYWORDS    BBC1 protein.

LOCUS       AB009087     1074 bp    mRNA            PLN       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA for alternative oxidase, partial cds.
ACCESSION   AB009087
NID         g2662189
KEYWORDS    alternative oxidase.

LOCUS       AB009088      589 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009088
NID         g2662191
                     /note="similar to acidic ribosomal protein P0"

LOCUS       AB009089      600 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009089
NID         g2662192
                     /note="similar to acidic ribosomal protein P0"

LOCUS       AB009090      484 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009090
NID         g2662193
                     /note="similar to ribosomal protein L6"

LOCUS       AB009091      409 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009091
NID         g2662194
                     /note="similar to ribosomal protein L6"

LOCUS       AB009092      879 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009092
NID         g2662195
                     /note="similar to photosystem II oxygen-evolving complex
                     33 kDa protein"

LOCUS       AB009093      479 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009093
NID         g2662196
                     /note="similar to photosystem II 10 kDa protein"

LOCUS       AB009094      688 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009094
NID         g2662197
                     /note="similar to photosystem I protein psaD"

LOCUS       AB009095      720 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009095
NID         g2662198
                     /note="similar to ribosomal protein S4"

LOCUS       AB009096      529 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009096
NID         g2662199
                     /note="similar to ribosomal protein L10.e"

LOCUS       AB009097      180 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009097
NID         g2662200
                     /note="similar to ribosomal protein L2"

LOCUS       AB009098      525 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009098
NID         g2662201
                     /note="similar to ribosomal protein L3"

LOCUS       AB009099      518 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009099
NID         g2662202
                     /note="similar to Rieske iron-sulfur protein"

LOCUS       AB009100      395 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009100
NID         g2662203
                     /note="similar to chlorophyll a/b binding protein II/1A"

LOCUS       AB009101      549 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009101
NID         g2662204
                     /note="similar to photosystem I protein psaL"

LOCUS       AB009102      639 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009102
NID         g2662205
                     /note="similar to photosystem I protein psaG"

LOCUS       AB009103      634 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009103
NID         g2662206
                     /note="similar to ferredoxin"

LOCUS       AB009104      371 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009104
NID         g2662207
                     /note="similar to chloroplast glyceraldehyde 3-phosphate
                     dehydrogenase"

LOCUS       AB009105      657 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009105
NID         g2662208
                     /note="similar to chloroplast
                     sedoheptulose-1,7-bisphosphatase"

LOCUS       AB009106      445 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009106
NID         g2662209
                     /note="similar to starch phosphorylase"

LOCUS       AB009107      574 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009107
NID         g2662210
                     /note="similar to phosphatidylinositol 3-kinase"

LOCUS       AB009108      552 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009108
NID         g2662211
                     /note="similar to UDPglucose-starch glucosyltransferase"

LOCUS       AB009109      266 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009109
NID         g2662212
                     /note="similar to H+-transporting ATP synthase gamma"

LOCUS       AB009110      588 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009110
NID         g2662213
                     /note="similar to chloroplast H+-transporting ATP
synthase B' chain"

LOCUS       AB009111      647 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009111
NID         g2662214
                     /note="similar to GTP-binding protein LEPA"

LOCUS       AB009112      425 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009112
NID         g2662215
                     /note="similar to alfalfa nucleic acid binding protein
                     (alfin-1)"

LOCUS       AB009113      471 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009113
NID         g2662216
                     /note="similar to 2-oxoglutarate/malate translocator"

LOCUS       AB009114      567 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009114
NID         g2662217
                     /note="similar to serine carboxypeptidase I"

LOCUS       AB009115      469 bp    mRNA            EST       05-DEC-1997
DEFINITION  Chlamydomonas sp. mRNA.
ACCESSION   AB009115
NID         g2662218
                     /note="similar to phosphate carrier protein"

For accession numbers AB009116 - AB009168 no identification is given.



LOCUS       D63571        795 bp    mRNA            PLN       05-DEC-1997
DEFINITION  Dunaliella salina mRNA for H+-ATPase, partial cds.
ACCESSION   D63571
NID         g2648165
KEYWORDS    DSA8; H+-ATPase.
SOURCE      Dunaliella salina cDNA to mRNA, clone:axenic.



LOCUS       CRCYC1GEN    3078 bp    DNA             PLN       06-OCT-1997
DEFINITION  Chlamydomonas reinhardtii CYC1 gene encoding cytochrome c.
ACCESSION   Z99829
NID         g2660499
KEYWORDS    cytochrome c.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       AF022816     2454 bp    mRNA            PLN       07-DEC-1997
DEFINITION  Chlamydomonas reinhardtii acetolactate synthase mRNA, complete cds.
ACCESSION   AF022816
NID         g2435504
SOURCE      Chlamydomonas reinhardtii.



LOCUS       AF024632     2432 bp    mRNA            PLN       07-DEC-1997
DEFINITION  Volvox carteri acetolactate synthase (als) mRNA, complete cds.
ACCESSION   AF024632
NID         g2565316
SOURCE      Volvox carteri.



LOCUS       CHCRRPS9     3599 bp    DNA             PLN       04-DEC-1997
DEFINITION  Chlamydomonas reinhardtii chloroplast DNA for rps9, ycf4, ycf3,
            rps18 genes.
ACCESSION   Y13655
NID         g2598284
KEYWORDS    30S ribosomal protein S18; 30S ribosomal protein S9; chloroplast;
            hypothetical 19 kd protein; hypothetical 22 kd protein; rps18 gene;
            rps9 gene; ycf3 gene; ycf4 gene.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRU80804     3320 bp    DNA             PLN       08-DEC-1997
DEFINITION  Chlamydomonas reinhardtii beta-carbonic anhydrase (ca1) gene,
            nuclear gene encoding mitochondrial protein, complete cds.
ACCESSION   U80804
NID         g1737485
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRU80805     3377 bp    DNA             PLN       08-DEC-1997
DEFINITION  Chlamydomonas reinhardtii beta-carbonic anhydrase (ca2) gene,
            nuclear gene encoding mitochondrial protein, complete cds.
ACCESSION   U80805
NID         g1737487
SOURCE      Chlamydomonas reinhardtii.



LOCUS       AB007640     2247 bp    mRNA            PLN       17-DEC-1997
DEFINITION  Chlamydomonas reinhardtii des6 mRNA for chloroplast w6 desaturase,
            complete cds.
ACCESSION   AB007640
NID         g2696716
KEYWORDS    chloroplast w6 desaturase.
SOURCE      Chlamydomonas reinhardtii cDNA to mRNA.



LOCUS       AF036311      601 bp    DNA             PLN       21-DEC-1997
DEFINITION  Dunaliella tertiolecta 28S ribosomal RNA gene, partial sequence.
ACCESSION   AF036311
NID         g2707276
SOURCE      Dunaliella tertiolecta.



LOCUS       AF036312      188 bp    mRNA            PLN       21-DEC-1997
DEFINITION  Dunaliella tertiolecta cyclin B (CYCL) mRNA, partial cds.
ACCESSION   AF036312
NID         g2707277
SOURCE      Dunaliella tertiolecta.



LOCUS       AF027727     2413 bp    mRNA            PLN       23-DEC-1997
DEFINITION  Chlamydomonas reinhardtii protein disulfide isomerase RB60 (PDI)
            mRNA, nuclear gene encoding chloroplast protein, complete cds.
ACCESSION   AF027727
NID         g2708313
SOURCE      Chlamydomonas reinhardtii.



LOCUS       AF038570      985 bp    mRNA            PLN       24-DEC-1997
DEFINITION  Dunaliella tertiolecta cyclin-dependent kinase 1 (DUNCDC2) mRNA,
            partial cds.
ACCESSION   AF038570
NID         g2708710
SOURCE      Dunaliella tertiolecta.



LOCUS       PSU87396     1113 bp    DNA             PLN       01-JAN-1998
DEFINITION  Polytomella sp. cytochrome b gene, mitochondrial gene encoding
            mitochondrial protein, complete cds.
ACCESSION   U87396
NID         g2735136
SOURCE      Polytomella sp.



LOCUS       CRU70999     2290 bp    mRNA            PLN       08-JAN-1998
DEFINITION  Chlamydomonas reinhardtii CCS1 mRNA, complete cds.
ACCESSION   U70999
NID         g2749938
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRU71000     5712 bp    DNA             PLN       08-JAN-1998
DEFINITION  Chlamydomonas reinhardtii CCS1 gene, complete cds.
ACCESSION   U71000
NID         g2749940
SOURCE      Chlamydomonas reinhardtii.



LOCUS       CRJ001179     523 bp    DNA             PLN       08-JAN-1998
DEFINITION  Chlamydomonas reinhardtii U3 small nucleolar RNA gene.
ACCESSION   AJ001179
NID         g2764603
KEYWORDS    U3 small nucleolar RNA gene.
SOURCE      Chlamydomonas reinhardtii.



LOCUS       SS95BASAL    3113 bp    RNA             PLN       08-JAN-1998
DEFINITION  Spermatozopsis similis mRNA for 95 kD basal apparatus-protein.
ACCESSION   AJ001438
NID         g2764622
KEYWORDS    95 kD protein; basal apparatus-protein.
SOURCE      Spermatozopsis similis.


(This is the end of the recent sequence files for January 27th.)






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