From jaiswalp from science.oregonstate.edu Thu May 7 02:21:16 2009 From: jaiswalp from science.oregonstate.edu (Pankaj Jaiswal (OSU)) Date: Thu May 7 08:57:33 2009 Subject: [Maize] PlantGeneWiki Beta release Message-ID: <4A028BEC.6080803@science.oregonstate.edu> From http://news.gramene.org/?p=220 PlantGeneWiki Beta release Posted on May 6, 2009, 5:40 PM, by pankaj, under Community news, Database release, Gramene, Gramene news. The Gramene database project team is happy to announce beta release of the PlantGeneWiki. It is designed as an online community portal on plant genes and their annotations. Our goal for PlantGeneWiki is to generate community curated/annotated pages where the researchers can browse, search, read and manage the content by editing. Yes, the biggest advantage of them all is that researchers now have the ability to update and edit the information known about the genes identified in plants on their own without any delays. If you don’t find a gene of your interest in the PlantGeneWiki, you can add it as well. Any content you add/edit on PlantGeneWiki is released for instant online access and cites your contribution. Therefore a good starting place is to add/edit information on known genes. PlantGeneWiki is freely accessible to everyone and you can help us make it better in following ways: * Share your knowledge by EDITING existing and/or ADDING new information to the existing gene pages. * Adding NEW GENE PAGES. * Adding links. * Correct and report our errors. We encourage first time users to get familiarized with the portal and user/contributor functions by taking the Guided Tours/Tutorials. The PlantGeneWiki website can be accessed from any of the following URL’s. http://plantgenewiki.gramene.org/ http://plantgenewiki.org/ Pankaj Jaiswal Web: www.gramene.org www.plantontology.org -- Pankaj Jaiswal Assistant Professor Dept. of Botany and Plant Pathology 3082 Cordley Hall Oregon State University Corvallis, OR, 97331-2902, USA Ph. +1-541-737-8471 Fax: +1-541-737-3573 Web: www.gramene.org www.plantontology.org From triffid from iastate.edu Fri May 15 16:19:03 2009 From: triffid from iastate.edu (Carolyn Lawrence) Date: Fri May 15 16:33:33 2009 Subject: [Maize] Browse maize projects or add your own at POPcorn! Message-ID: <6B478F7E-5795-4573-A867-B29161AFEAB7@iastate.edu> Maize BioNet Members, I am writing to announce that POPcorn, the Project Portal for corn, has been released! It can be accessed online at http://www.maizegdb.org/POPcorn or by clicking the link to POPcorn in the left margin of MaizeGDB's main page. POPcorn is an NSF-funded project (DBI #074380) ancillary to MaizeGDB that currently provides a searchable database of maize projects and resources. During Phase 2 of development, we plan to enable researchers to retrieve sequence data from multiple sources with one query - BLASTing lots of sources from one place! Work on POPcorn began in February of 2009. It will be released in three phases over two years. Phase 1 (current) Provide a searchable database of maize projects and resources. Phase 2 Provide tools for sequence-based searching of participating maize projects and resources. Phase 3 Provide behind-the-scenes tools to enable projects to transition their data to MaizeGDB when the projects are complete. Upon completion, POPcorn will become a part of MaizeGDB. Status The initial set of searchable projects was released in April '09 and we are continuing to add projects to the searchable database. We are in the process of setting up a forum for coordinating annotation efforts. NOTE THAT WE ARE CURRENTLY HIRING A PROGRAMMER! Apply online at https://www.iastatejobs.com/applicants/jsp/shared/frameset/Frameset.jsp?time=1242422222540 before May 30! Thanks! Carolyn Lawrence (PI), Taner Sen (coPI), and Ethy Cannon (Solution/ Application Architect)