IUBio

corrupt O files...how to rescue???

Gerard Kleijwegt gerard at rigel.bmc.uu.se
Mon Jun 19 16:06:58 EST 1995


In article <3s4h79$pqr at news.duke.edu>, bussiere at PROBLEM_WITH_INEWS_GATEWAY_FILE (Dirksen Bussiere) writes:
|> My O database has apparently been corrupted and I've lost all the models
|> on there.  I can't sam_at_out the coordinates onto a PDB file, because
|> it has apparently lost all contact with them.  Does anyone have any
|> ideas??  Thanks!
|> 
|> -Dirk Bussiere
|>  'bussiere at abacus.mc.duke.edu'
|> 

first, make sure it's not an NFS problem

then, try reading it with sam_at_in and tell the program
you're reading a structure in O format

if that doesn't work, I'm afraid you probably
have lost whatever was in it

--cd



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