From ozgun.harmanci from gmail.com Thu Jul 3 23:56:59 2008 From: ozgun.harmanci from gmail.com (ozgun.harmanci) Date: Fri Jul 4 10:45:21 2008 Subject: [Molecular-modelling] Interpolate missing residues in pdb files Message-ID: Hello, I am having trouuble with missing residues in pdb files and need to replace them (i.e. interpolate them) using a program. I think swiss- pdbviewer and pymol do that. My problem is that I am not very capable of using those programs and the person whom I asked for help told me that I have to check for missing residues in pdb file, open swiss- pdbviewer then add residue at correct place and finally she told me that I might need to do an energy minimization and I am thinking that I will definitely do a mistake there. I was wondering if anyone knows a more automated way to get the missing residues inserted for me because I am thinking that you can find missing residues in pdb and and programs can read that info and add these missing residues themselves automatically.. (but again maybe not..) Thanks. Sincerely, Arif.