From jamesjjcai from gmail.com  Thu Jun 21 18:57:10 2007
From: jamesjjcai from gmail.com (jamescai)
Date: Thu Jun 21 21:00:44 2007
Subject: [Population-biology] PGEToolbox: a Matlab toolbox for Population
	Genetics & Evolution
Message-ID: <1182470230.618638.272160@j4g2000prf.googlegroups.com>

Dear All,

PGEToolbox is a Matlab-based program for analysis of polymorphism and
divergence data in population genetics and evolution. It computes
basic statistics of DNA sequence variation and carries out neutrality
tests, such as Tajima's D test, Fu & Li's tests and Fay & Wu's H test.
The significance of tests is determined from the distribution of the
statistics obtained by coalescent simulation. The toolbox performs
McDonald-Kreitman test (and several extensions), and also contains
functions for handling SNP genotype and haplotype data. The latest
version of the program can be obtained from:

http://bioinformatics.org/pgetoolbox/

All the best,

James