IUBio Biosequences .. Software .. Molbio soft .. Network News .. FTP

Phi-psi Distributions of proteins

C.S.RAMAN raman at BIOC01.UTHSCSA.EDU
Sun Jul 16 16:59:59 EST 1995


Charlie:

> Does anybody out there have a script of some sort for obtaining phi-psi
> values from a PDB file. If you do could you mail it to me, otherwise I'll
> probably have to set up for X-PLOR and do it that way.

If you run your pdb file through DSSP the output should give you phi,
psi and chi listings.  You can obtain DSSP by contacting
sander at embl-heidelberg.de.  Note that DSSP can do many other things,
but, this is one of them.

Hope this helps.
Cheers
-raman
-- 
   _/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/
   _/                                                                      _/
   _/                           C.S.RAMAN                                  _/
   _/                   Department of Biochemistry                         _/
   _/            University of Texas Health Science Center                 _/
   _/                     7703 Floyd Curl Drive                            _/
   _/                  San Antonio, TX 78284-7760                          _/
   _/                              USA                                     _/
   _/                                                                      _/
   _/                    Tel:     (210) 567-6623                           _/
   _/                    Fax:     (210) 567-6595                           _/
   _/                 E-mail:  raman at bioc01.uthscsa.edu                    _/
   _/                                                                      _/
   _/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/  
   _/                                                                      _/
   _/      How can it be that mathematics, a product of human thought      _/ 
   _/      independent of experience, is so admirably adapted to the       _/ 
   _/      objects of reality?   -Albert Einstein                          _/
   _/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/





More information about the Xtal-log mailing list

Send comments to us at biosci-help [At] net.bio.net