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Amore searches with 2 models

Mike Karpusas michael_karpusas at biogen.com
Tue Jun 15 16:55:37 EST 1999


I have located the Fconst domain of a Fab fragment in the unit cell and
I am trying to locate the Fv.
The Fv by itself is not producing any strong rotation or translation
peaks so I would like to do a combined
search were I keep my Fconst fixed.
Questions:
1) The Amore manual does not have any example scripts for this. Can
somebody send me example scripts?
2) Can I do combined rotation search for the Fv while keeping the Fconst
fixed?
2) I guess I should produce separate TABLE1 and TABLE2  files for the Fv
and Fconst, but the
TABLING script would rotate the Fconst and that's something I don't
want.

Thanks
Mike





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