New Saccharomyces Sequences 02/14/04

SGD Sequences yeast-seq at genome.stanford.edu
Sat Feb 14 12:39:45 EST 2004


====================== New DNA Sequences =======================

AY278445    AY278445      291bp    linear   PLN      12-FEB-2004
    Saccharomyces cerevisiae Sus1p (SUS1) mRNA, complete cds.
    SUS1; Sus1p.

AY529199    AY529199      755bp    linear   PLN      14-FEB-2004
    Saccharomyces cerevisiae isolate YM 3 internal transcribed spacer 1,
     partial sequence; 5.8S ribosomal RNA gene, complete sequence; and
     internal transcribed spacer 2, partial sequence.
    internal transcribed spacer 1; 5.8S ribosomal RNA; internal transcribed
     spacer 2.

AY529200    AY529200      755bp    linear   PLN      14-FEB-2004
    Saccharomyces cerevisiae isolate YM 1.6 internal transcribed spacer 1,
     partial sequence; 5.8S ribosomal RNA gene, complete sequence; and
     internal transcribed spacer 2, partial sequence.
    internal transcribed spacer 1; 5.8S ribosomal RNA; internal transcribed
     spacer 2.

==================== Updated DNA Sequences =====================

YSCH8167    U14913 Y13138    38870bp    linear   PLN      13-FEB-2004
    Saccharomyces cerevisiae chromosome XII cosmid 8167.
    YLR191W; Pas20p: component of peroxisomal protein import machinery;
     YLR192C; Ylr192cp; YLR193C; Ylr193cp; YLR194C; Ylr194cp; NMT1; Nmt1p:
     N-Myristoyltransferase; PWP1; Pwp1p; SIK1; Sik1p; YLR198C; Ylr198cp;
     YLR199C; Ylr199cp; YKE2; Yke2p: polypeptide 6 of a yeast non-native
     actin binding complex; YLR201C; Ylr201cp; YLR202C; Ylr202cp; MSS51;
     Mss51p: Probable initiation factor specific for translation of COX1 and
     COB mRNA; QRI5; Qri5p; YLR205C; Ylr205cp; YLR206W; Ylr206wp; YLR207W;
     Ylr207wp; SEC13; Sec13p; YLR209C; Ylr209c: purine-nucleoside
     phosphorylase; CLB4; Clb4p: G2-specific B-type cyclin; YLR211C;
     Ylr211cp; TUB4; Tub4p: gamma tubulin-like protein; YLR213C; Ylr213cp;
     FRE1; Fre1p: Ferric (and cupric) reductase; YLR215C; Ylr215cp; CPR6;
     Cpr6p: cyclophilin related to the mammalian CyP-40; YLR217C; Ylr217wp;
     YLR218C; Ylr218cp; YLR219W; Ylr219wp; CCC1; Ccc1p: putative
     transmembrane Ca2+ transporter.

YSCL8084    U19729 Y13138    40198bp    linear   PLN      13-FEB-2004
    Saccharomyces cerevisiae chromosome XII cosmid 8084.
    YLR387C; Ylr387cp; YLR388W; Ylr388wp; SNR34; STE23; Ste23p; ECM19;
     Ecm19p; YLR391W-A; Ylr391w-ap; YLR392C; Ylr392cp; ATP10; Atp10p:
     essential for the assembly of the mitochondrial ATPase complex; YLR394W;
     Ylr394wp; COX8; Cox8p: cytochrome c oxidase polypeptide VIII; VPS33;
     Vps33p; AFG2; Afg2p; SKI2; Ski2p: Antiviral protein; BDF1; Bdf1p;
     YLR400W; Ylr400wp; YLR401C; Ylr401cp; YLR402W; Ylr402wp; SFP1; Sfp1p;
     YLR404W; Ylr404wp; YLR405W; Ylr405wp; YLR406C; Ylr406cp: member of L31E
     ribosomal protein family; YLR407W; Ylr407wp; YLR408C; Ylr408cp; YLR409C;
     Ylr409cp.

YSCL8543    U20618 Y13138    37728bp    linear   PLN      13-FEB-2004
    Saccharomyces cerevisiae chromosome XII cosmid 8543.
    CDC25; Cdc25p: regulatory protein of adenylate cyclase; YLR311C;
     Ylr311cp; YLR312C; Ylr312cp; MRPL15; Mrpl15p: mitochondrial ribosomal
     protein YmL15; YLR313C; Ylr313cp; CDC3; Cdc3p: component of 10 nm
     filaments of mother-bud neck; YLR315w; Ylr315wp; YLR316C; Ylr316cp;
     YLR317W; Ylr317wp; EST2; Est2p: putative subunit of telomerase; BUD6;
     Bud6p: actin interacting protein; YLR320W; Ylr320wp; YLR321C; Ylr321cp;
     YLR322W; Ylr322wp; YLR323C; Ylr323cp; YLR324W; Ylr324wp; YLR325C;
     Ylr325cp; YLR326W; Ylr326wp; YLR327C; Ylr327cp; tRNA-Ser; YLR328W;
     Ylr328wp; REC102; Rec102p: Required for early meiotic recombination
     events; YLR330W; Ylr330wp; YLR331C; Ylr331cp; MID2; Mid2p: Mating
     process protein.

=========== Updated Sequence Features/Annotations  =============

AY235811    AY235811      807bp    linear   PLN      12-FEB-2004
    Saccharomyces cerevisiae 18S ribosomal RNA gene, partial sequence;
     internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal
     transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene,
     partial sequence.
    18S ribosomal RNA; internal transcribed spacer 1; 5.8S ribosomal RNA;
     internal transcribed spacer 2; 28S ribosomal RNA.

YSCPLASM    J01347 L00321 L00322 L00323 L00324 M10185 M11111 M11593 M14239     6318bp    circular PLN      11-FEB-2004
    Saccharomyces cerevisiae 2 micron circle plasmid, complete sequence.
    DNA-binding protein; Rep-1 protein; Rep-2 protein; circular; complete
     genome; d protein; plasmid; protein FLP; recombinase; repeat region; Flp
     mRNA; recombinase (FLP); Rep 1 protein; D protein; Rep 2 protein.


World Wide Web hyperlinks for sequence information:
  BLAST & FASTA:  http://www.yeastgenome.org/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Genbank/GenbankSearch.html
     EBI (EMBL):  http://www.ebi.ac.uk/embl/Access/index.html
           DDBJ:  http://www.ddbj.nig.ac.jp/searches-e.html

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